Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.25■□□□□ 0.67
NCKIPSDQ9NZQ3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKIPSDQ9NZQ3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.25■□□□□ 0.67
NCKIPSDQ9NZQ3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NCKIPSDQ9NZQ3 AC093503.3-201ENST00000624917 2352 ntBASIC19.25■□□□□ 0.67
NCKIPSDQ9NZQ3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 AC018553.1-201ENST00000616682 1458 ntBASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 AP000525.1-201ENST00000608286 694 ntBASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCKIPSDQ9NZQ3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 MIR1238-201ENST00000408483 83 ntBASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 FITM1-202ENST00000559294 800 ntBASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 MIR6786-201ENST00000616843 113 ntBASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 KRT18P22-201ENST00000402024 1347 ntBASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCKIPSDQ9NZQ3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 AC079598.2-202ENST00000546624 1451 ntBASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 FSCN1P1-201ENST00000568912 1481 ntBASIC19.22■□□□□ 0.67
NCKIPSDQ9NZQ3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 LINC01568-207ENST00000641790 1380 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 YBX1P10-201ENST00000444752 975 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 C1QL1P1-201ENST00000568105 661 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 AC116351.2-201ENST00000606540 1585 ntBASIC19.21■□□□□ 0.67
NCKIPSDQ9NZQ3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms