Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB16Q9NRJ7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 AC141586.3-201ENST00000562166 1838 ntBASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 SLC29A4P1-201ENST00000398760 971 ntBASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB16Q9NRJ7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 AC012313.1-201ENST00000593393 3059 ntBASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHB16Q9NRJ7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 AC090192.1-201ENST00000517740 490 ntBASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB16Q9NRJ7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 AP006587.1-201ENST00000534129 1502 ntBASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 NCF1B-203ENST00000435988 1254 ntBASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 YBX1P10-201ENST00000444752 975 ntBASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 AC092118.2-201ENST00000613495 667 ntBASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHB16Q9NRJ7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms