Protein–RNA interactions for Protein: Q9NQV8

PRDM8, PR domain zinc finger protein 8, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8Q9NQV8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM8Q9NQV8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM8Q9NQV8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRDM8Q9NQV8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRDM8Q9NQV8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.77■□□□□ 0.6
PRDM8Q9NQV8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRDM8Q9NQV8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRDM8Q9NQV8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PRDM8Q9NQV8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 KRT18P22-201ENST00000402024 1347 ntBASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PRDM8Q9NQV8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 KRT8P11-201ENST00000409686 1436 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 AIRN-201ENST00000601203 4374 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 TSPY14P-201ENST00000303979 915 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 INGX-201ENST00000359239 846 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 CKBP1-201ENST00000565489 1086 ntBASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRDM8Q9NQV8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRDM8Q9NQV8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms