Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MKKSQ9NPJ1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
MKKSQ9NPJ1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MKKSQ9NPJ1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.02■□□□□ 0.47
MKKSQ9NPJ1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
MKKSQ9NPJ1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
MKKSQ9NPJ1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.02■□□□□ 0.47
MKKSQ9NPJ1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 TSPY17P-201ENST00000450329 467 ntBASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MKKSQ9NPJ1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18■□□□□ 0.47
MKKSQ9NPJ1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18■□□□□ 0.47
MKKSQ9NPJ1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18■□□□□ 0.47
MKKSQ9NPJ1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18■□□□□ 0.47
MKKSQ9NPJ1 AC113347.1-201ENST00000413321 391 ntBASIC18■□□□□ 0.47
MKKSQ9NPJ1 SLC25A3P1-201ENST00000443844 931 ntBASIC18■□□□□ 0.47
MKKSQ9NPJ1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
MKKSQ9NPJ1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MKKSQ9NPJ1 AC116562.4-201ENST00000641316 2276 ntBASIC18■□□□□ 0.47
MKKSQ9NPJ1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 TSPY23P-201ENST00000440136 739 ntBASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 AC010653.2-201ENST00000623505 997 ntBASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MKKSQ9NPJ1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms