Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 BX664615.1-201ENST00000443558 458 ntBASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 ATP5G1P1-201ENST00000448724 379 ntBASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 AC104076.2-201ENST00000448912 469 ntBASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 AL512604.3-201ENST00000569583 964 ntBASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.32■□□□□ 0.36
SH2D2AQ9NP31 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 KRT8P45-201ENST00000414328 1447 ntBASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AC141257.4-201ENST00000634557 245 ntBASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 AC136944.6-201ENST00000634818 245 ntBASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SH2D2AQ9NP31 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 FP475955.4-201ENST00000623131 1990 ntBASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 MIR1224-201ENST00000408193 85 ntBASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 AC010331.1-201ENST00000611423 582 ntBASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SH2D2AQ9NP31 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SH2D2AQ9NP31 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms