Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 AC190387.1-201ENST00000551683 408 ntBASIC17.73■□□□□ 0.43
CHD8Q9HCK8 AC040169.1-201ENST00000565382 521 ntBASIC17.73■□□□□ 0.43
CHD8Q9HCK8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.73■□□□□ 0.43
CHD8Q9HCK8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 AC005332.3-201ENST00000589904 676 ntBASIC17.72■□□□□ 0.43
CHD8Q9HCK8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 RNA5SP415-201ENST00000517246 115 ntBASIC17.72■□□□□ 0.43
CHD8Q9HCK8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHD8Q9HCK8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 MINOS1P3-201ENST00000457048 203 ntBASIC17.71■□□□□ 0.43
CHD8Q9HCK8 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 AC005336.2-201ENST00000593183 939 ntBASIC17.71■□□□□ 0.43
CHD8Q9HCK8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHD8Q9HCK8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHD8Q9HCK8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 AC011467.4-201ENST00000594891 528 ntBASIC17.7■□□□□ 0.42
CHD8Q9HCK8 MTDHP5-201ENST00000598980 586 ntBASIC17.7■□□□□ 0.42
CHD8Q9HCK8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 HLA-J-201ENST00000462773 1622 ntBASIC17.7■□□□□ 0.42
CHD8Q9HCK8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHD8Q9HCK8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHD8Q9HCK8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.68■□□□□ 0.42
CHD8Q9HCK8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms