Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 AC116351.2-201ENST00000606540 1585 ntBASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LIN28AQ9H9Z2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AC133681.1-201ENST00000465482 601 ntBASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AC008550.1-201ENST00000511500 884 ntBASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 Z99916.2-201ENST00000604037 246 ntBASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LIN28AQ9H9Z2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 RPS2P4-201ENST00000476944 856 ntBASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LIN28AQ9H9Z2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 TFP1-202ENST00000475455 1573 ntBASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.27■□□□□ 0.52
LIN28AQ9H9Z2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.27■□□□□ 0.51
LIN28AQ9H9Z2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LIN28AQ9H9Z2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LIN28AQ9H9Z2 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LIN28AQ9H9Z2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.27■□□□□ 0.51
LIN28AQ9H9Z2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
LIN28AQ9H9Z2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LIN28AQ9H9Z2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN28AQ9H9Z2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN28AQ9H9Z2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LIN28AQ9H9Z2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms