Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 BX664615.1-201ENST00000443558 458 ntBASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 KRT8P17-201ENST00000453110 1448 ntBASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
POLR1BQ9H9Y6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 AK4P3-201ENST00000418260 669 ntBASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 CRYGFP-201ENST00000418459 633 ntBASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 AC097488.1-201ENST00000507834 756 ntBASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
POLR1BQ9H9Y6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 AC091076.1-201ENST00000610741 619 ntBASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
POLR1BQ9H9Y6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 AC011506.1-201ENST00000474329 610 ntBASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 AC022616.7-201ENST00000525383 220 ntBASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 AC131212.4-201ENST00000623606 975 ntBASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
POLR1BQ9H9Y6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms