Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 RPS2P52-201ENST00000469610 820 ntBASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 AL512353.2-201ENST00000448759 1962 ntBASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
COMMD4Q9H0A8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 AC135050.7-201ENST00000624508 2218 ntBASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 IKBKGP1-201ENST00000612193 1073 ntBASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COMMD4Q9H0A8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AC124283.5-201ENST00000624661 1809 ntBASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 CDCA4P2-201ENST00000441182 718 ntBASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AC006557.6-201ENST00000623071 864 ntBASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COMMD4Q9H0A8 FEM1AP3-201ENST00000403722 1741 ntBASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COMMD4Q9H0A8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms