Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 AL391807.1-203ENST00000604392 2365 ntBASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 AL137060.1-201ENST00000618151 2648 ntBASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDH11XQ9BZA7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.7■■□□□ 1.55
PCDH11XQ9BZA7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDH11XQ9BZA7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDH11XQ9BZA7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDH11XQ9BZA7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 FAAHP1-202ENST00000446499 1238 ntBASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 UNC93B7-201ENST00000509439 705 ntBASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDH11XQ9BZA7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 AL845331.1-201ENST00000424978 1190 ntBASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 NUS1P1-201ENST00000446295 882 ntBASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDH11XQ9BZA7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 KRT17P6-201ENST00000453795 1220 ntBASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 LBX2-AS1-202ENST00000603175 2083 ntBASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH11XQ9BZA7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 TSPY22P-201ENST00000427496 604 ntBASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH11XQ9BZA7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 TPSP2-201ENST00000561760 610 ntBASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 IFNL4P1-201ENST00000607083 540 ntBASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH11XQ9BZA7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms