Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CNTNAP3Q9BZ76 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 METTL21AP1-201ENST00000438852 635 ntBASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 DNAJB3-202ENST00000449667 1266 ntBASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNTNAP3Q9BZ76 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 AC139887.3-201ENST00000568585 713 ntBASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3Q9BZ76 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 KRT8P20-201ENST00000423953 1409 ntBASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3Q9BZ76 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CNTNAP3Q9BZ76 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms