Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PTPN18Q99952 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN18Q99952 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN18Q99952 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN18Q99952 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 AC074051.2-201ENST00000565115 352 ntBASIC21.84■■□□□ 1.09
PTPN18Q99952 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.84■■□□□ 1.09
PTPN18Q99952 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.84■■□□□ 1.09
PTPN18Q99952 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.84■■□□□ 1.09
PTPN18Q99952 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 AC012676.1-201ENST00000574705 1949 ntBASIC21.84■■□□□ 1.09
PTPN18Q99952 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PTPN18Q99952 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.84■■□□□ 1.09
PTPN18Q99952 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTPN18Q99952 AL590627.1-203ENST00000421194 1026 ntBASIC21.83■■□□□ 1.09
PTPN18Q99952 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.83■■□□□ 1.09
PTPN18Q99952 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PTPN18Q99952 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.83■■□□□ 1.09
PTPN18Q99952 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AC005332.3-201ENST00000589904 676 ntBASIC21.83■■□□□ 1.09
PTPN18Q99952 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.83■■□□□ 1.09
PTPN18Q99952 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.83■■□□□ 1.09
PTPN18Q99952 AF228730.7-201ENST00000641842 219 ntBASIC21.83■■□□□ 1.09
PTPN18Q99952 SDHAP1-207ENST00000440850 2000 ntBASIC21.83■■□□□ 1.09
PTPN18Q99952 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PTPN18Q99952 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.83■■□□□ 1.08
PTPN18Q99952 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.83■■□□□ 1.08
PTPN18Q99952 ZNF815P-204ENST00000434898 1737 ntBASIC21.83■■□□□ 1.08
PTPN18Q99952 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 AL512408.1-201ENST00000569378 2000 ntBASIC21.82■■□□□ 1.08
PTPN18Q99952 LINC00167-201ENST00000530583 1419 ntBASIC21.82■■□□□ 1.08
PTPN18Q99952 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN18Q99952 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN18Q99952 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.82■■□□□ 1.08
PTPN18Q99952 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 MIR574-201ENST00000385209 96 ntBASIC21.82■■□□□ 1.08
PTPN18Q99952 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.82■■□□□ 1.08
PTPN18Q99952 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.82■■□□□ 1.08
PTPN18Q99952 RNA5SP419-201ENST00000515908 135 ntBASIC21.82■■□□□ 1.08
PTPN18Q99952 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.82■■□□□ 1.08
PTPN18Q99952 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN18Q99952 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.82■■□□□ 1.08
PTPN18Q99952 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTPN18Q99952 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PTPN18Q99952 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PTPN18Q99952 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PTPN18Q99952 AL391422.3-201ENST00000603791 2761 ntBASIC21.81■■□□□ 1.08
PTPN18Q99952 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPN18Q99952 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.81■■□□□ 1.08
PTPN18Q99952 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PTPN18Q99952 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 AC233702.3-201ENST00000578656 1387 ntBASIC21.81■■□□□ 1.08
PTPN18Q99952 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PTPN18Q99952 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTPN18Q99952 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.8■■□□□ 1.08
PTPN18Q99952 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTPN18Q99952 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN18Q99952 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTPN18Q99952 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN18Q99952 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.8■■□□□ 1.08
PTPN18Q99952 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.8■■□□□ 1.08
PTPN18Q99952 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PTPN18Q99952 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN18Q99952 AC090616.6-201ENST00000582640 721 ntBASIC21.8■■□□□ 1.08
PTPN18Q99952 AC099336.1-202ENST00000602961 463 ntBASIC21.8■■□□□ 1.08
PTPN18Q99952 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTPN18Q99952 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTPN18Q99952 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms