Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS2Q99743 C1QBPP2-201ENST00000528754 825 ntBASIC18.62■□□□□ 0.57
NPAS2Q99743 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS2Q99743 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS2Q99743 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.62■□□□□ 0.57
NPAS2Q99743 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NPAS2Q99743 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.62■□□□□ 0.57
NPAS2Q99743 AC090164.3-201ENST00000610780 2143 ntBASIC18.62■□□□□ 0.57
NPAS2Q99743 AL133373.2-201ENST00000623187 2828 ntBASIC18.62■□□□□ 0.57
NPAS2Q99743 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NPAS2Q99743 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
NPAS2Q99743 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NPAS2Q99743 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS2Q99743 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.61■□□□□ 0.57
NPAS2Q99743 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.61■□□□□ 0.57
NPAS2Q99743 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
NPAS2Q99743 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.61■□□□□ 0.57
NPAS2Q99743 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.61■□□□□ 0.57
NPAS2Q99743 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.61■□□□□ 0.57
NPAS2Q99743 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NPAS2Q99743 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
NPAS2Q99743 FP475955.4-201ENST00000623131 1990 ntBASIC18.61■□□□□ 0.57
NPAS2Q99743 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPAS2Q99743 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 AC018553.1-201ENST00000616682 1458 ntBASIC18.6■□□□□ 0.57
NPAS2Q99743 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NPAS2Q99743 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NPAS2Q99743 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS2Q99743 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
NPAS2Q99743 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 MTDHP1-201ENST00000605323 784 ntBASIC18.6■□□□□ 0.57
NPAS2Q99743 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.6■□□□□ 0.57
NPAS2Q99743 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
NPAS2Q99743 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPAS2Q99743 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NPAS2Q99743 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 AL031598.1-201ENST00000561511 1773 ntBASIC18.6■□□□□ 0.57
NPAS2Q99743 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NPAS2Q99743 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.6■□□□□ 0.57
NPAS2Q99743 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NPAS2Q99743 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms