Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
LRCH3Q96II8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRCH3Q96II8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 LINC01465-201ENST00000408887 1940 ntBASIC20.59■□□□□ 0.89
LRCH3Q96II8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 UPF3AP3-201ENST00000420996 769 ntBASIC20.59■□□□□ 0.89
LRCH3Q96II8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 PGAM5P1-201ENST00000518923 814 ntBASIC20.59■□□□□ 0.89
LRCH3Q96II8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 AC009065.1-201ENST00000564055 1225 ntBASIC20.59■□□□□ 0.89
LRCH3Q96II8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRCH3Q96II8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LRCH3Q96II8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 AC024243.1-201ENST00000609234 778 ntBASIC20.58■□□□□ 0.89
LRCH3Q96II8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRCH3Q96II8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.58■□□□□ 0.89
LRCH3Q96II8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LRCH3Q96II8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.58■□□□□ 0.88
LRCH3Q96II8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRCH3Q96II8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.58■□□□□ 0.88
LRCH3Q96II8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.57■□□□□ 0.88
LRCH3Q96II8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRCH3Q96II8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 KRT18P67-201ENST00000432816 1264 ntBASIC20.56■□□□□ 0.88
LRCH3Q96II8 AC093909.1-201ENST00000504731 1122 ntBASIC20.56■□□□□ 0.88
LRCH3Q96II8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
LRCH3Q96II8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRCH3Q96II8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.55■□□□□ 0.88
LRCH3Q96II8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH3Q96II8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.55■□□□□ 0.88
LRCH3Q96II8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRCH3Q96II8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms