Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 AL121829.2-201ENST00000620908 328 ntBASIC16.54■□□□□ 0.24
CPNE2Q96FN4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CPNE2Q96FN4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.53■□□□□ 0.24
CPNE2Q96FN4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CPNE2Q96FN4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 AC104417.2-201ENST00000562989 1793 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 FP475955.4-201ENST00000623131 1990 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 KRT18P16-201ENST00000510337 1294 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 PNMA6B-201ENST00000538162 1200 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 IKBKGP1-201ENST00000612193 1073 ntBASIC16.52■□□□□ 0.24
CPNE2Q96FN4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE2Q96FN4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE2Q96FN4 IRX1P1-201ENST00000438849 1838 ntBASIC16.52■□□□□ 0.23
CPNE2Q96FN4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE2Q96FN4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms