Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHCHD1Q96BP2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CHCHD1Q96BP2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 DUX4L19-201ENST00000557448 1267 ntBASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 FER1L4-210ENST00000615531 5998 ntBASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHCHD1Q96BP2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 ZNF815P-204ENST00000434898 1737 ntBASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHCHD1Q96BP2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 ABHD17AP5-201ENST00000580133 923 ntBASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHCHD1Q96BP2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms