Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 AC087289.5-201ENST00000586076 3175 ntBASIC18.31■□□□□ 0.52
UBE2E3Q969T4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.31■□□□□ 0.52
UBE2E3Q969T4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 AC098590.1-201ENST00000468126 897 ntBASIC18.31■□□□□ 0.52
UBE2E3Q969T4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.31■□□□□ 0.52
UBE2E3Q969T4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 RCC2P6-201ENST00000526625 1557 ntBASIC18.3■□□□□ 0.52
UBE2E3Q969T4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 ABHD17AP1-201ENST00000358206 933 ntBASIC18.3■□□□□ 0.52
UBE2E3Q969T4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBE2E3Q969T4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.29■□□□□ 0.52
UBE2E3Q969T4 AC012618.2-201ENST00000428058 849 ntBASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 AC011298.2-201ENST00000617989 482 ntBASIC18.29■□□□□ 0.52
UBE2E3Q969T4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.29■□□□□ 0.52
UBE2E3Q969T4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.29■□□□□ 0.52
UBE2E3Q969T4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms