Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 RNA5SP413-201ENST00000516373 109 ntBASIC17.09■□□□□ 0.33
PTP4A1Q93096 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 UNC93B5-201ENST00000530315 699 ntBASIC17.09■□□□□ 0.33
PTP4A1Q93096 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 AIRN-201ENST00000601203 4374 ntBASIC17.09■□□□□ 0.33
PTP4A1Q93096 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTP4A1Q93096 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTP4A1Q93096 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTP4A1Q93096 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.08■□□□□ 0.33
PTP4A1Q93096 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 UNC93B4-201ENST00000505679 747 ntBASIC17.08■□□□□ 0.32
PTP4A1Q93096 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTP4A1Q93096 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PTP4A1Q93096 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTP4A1Q93096 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 SOX15-203ENST00000570788 1093 ntBASIC17.07■□□□□ 0.32
PTP4A1Q93096 AC008687.6-201ENST00000596318 630 ntBASIC17.07■□□□□ 0.32
PTP4A1Q93096 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.07■□□□□ 0.32
PTP4A1Q93096 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms