Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3S1Q92572 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S1Q92572 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
AP3S1Q92572 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP3S1Q92572 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3S1Q92572 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
AP3S1Q92572 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3S1Q92572 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
AP3S1Q92572 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
AP3S1Q92572 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.78■□□□□ 0.28
AP3S1Q92572 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.78■□□□□ 0.28
AP3S1Q92572 AL035685.1-201ENST00000636663 812 ntBASIC16.78■□□□□ 0.28
AP3S1Q92572 AC083906.6-201ENST00000641366 219 ntBASIC16.78■□□□□ 0.28
AP3S1Q92572 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
AP3S1Q92572 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
AP3S1Q92572 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.78■□□□□ 0.28
AP3S1Q92572 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP3S1Q92572 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
AP3S1Q92572 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP3S1Q92572 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
AP3S1Q92572 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3S1Q92572 AC019069.1-201ENST00000610008 1333 ntBASIC16.77■□□□□ 0.28
AP3S1Q92572 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3S1Q92572 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP3S1Q92572 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
AP3S1Q92572 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.77■□□□□ 0.28
AP3S1Q92572 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.77■□□□□ 0.28
AP3S1Q92572 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
AP3S1Q92572 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.77■□□□□ 0.28
AP3S1Q92572 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
AP3S1Q92572 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP3S1Q92572 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.77■□□□□ 0.27
AP3S1Q92572 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.77■□□□□ 0.27
AP3S1Q92572 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP3S1Q92572 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.77■□□□□ 0.27
AP3S1Q92572 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
AP3S1Q92572 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
AP3S1Q92572 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.76■□□□□ 0.27
AP3S1Q92572 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP3S1Q92572 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 AL136116.3-201ENST00000402907 1138 ntBASIC16.76■□□□□ 0.27
AP3S1Q92572 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.76■□□□□ 0.27
AP3S1Q92572 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP3S1Q92572 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
AP3S1Q92572 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.76■□□□□ 0.27
AP3S1Q92572 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms