Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 KRT18P41-201ENST00000518924 1277 ntBASIC19.26■□□□□ 0.67
CHD5Q8TDI0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHD5Q8TDI0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 AC005521.1-201ENST00000393351 872 ntBASIC19.25■□□□□ 0.67
CHD5Q8TDI0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 AC092865.7-201ENST00000641832 219 ntBASIC19.25■□□□□ 0.67
CHD5Q8TDI0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.25■□□□□ 0.67
CHD5Q8TDI0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CHD5Q8TDI0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 AC009947.2-201ENST00000444014 672 ntBASIC19.24■□□□□ 0.67
CHD5Q8TDI0 AC116562.4-202ENST00000641738 218 ntBASIC19.24■□□□□ 0.67
CHD5Q8TDI0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.24■□□□□ 0.67
CHD5Q8TDI0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 KRT18P57-201ENST00000443599 1254 ntBASIC19.23■□□□□ 0.67
CHD5Q8TDI0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 FAM87A-204ENST00000613235 858 ntBASIC19.23■□□□□ 0.67
CHD5Q8TDI0 CR769767.2-201ENST00000622735 460 ntBASIC19.23■□□□□ 0.67
CHD5Q8TDI0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.23■□□□□ 0.67
CHD5Q8TDI0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms