Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IL1Q8TBN0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 SDHAP1-207ENST00000440850 2000 ntBASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IL1Q8TBN0 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 CYP2T1P-201ENST00000432607 1285 ntBASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 DUX4L16-201ENST00000555130 1264 ntBASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 NTF6G-201ENST00000591094 616 ntBASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IL1Q8TBN0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 AC010980.2-201ENST00000587099 1412 ntBASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.95■□□□□ 0.62
RAB3IL1Q8TBN0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms