Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 MFAP1P1-201ENST00000442257 1255 ntBASIC20.17■□□□□ 0.82
UBA3Q8TBC4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 FP475955.4-201ENST00000623131 1990 ntBASIC20.17■□□□□ 0.82
UBA3Q8TBC4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 PRSS44-201ENST00000515154 1146 ntBASIC20.16■□□□□ 0.82
UBA3Q8TBC4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
UBA3Q8TBC4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.15■□□□□ 0.82
UBA3Q8TBC4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 KRT8P9-201ENST00000558927 1449 ntBASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
UBA3Q8TBC4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
UBA3Q8TBC4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AC096733.2-201ENST00000609937 1394 ntBASIC20.14■□□□□ 0.81
UBA3Q8TBC4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AC087289.5-201ENST00000586076 3175 ntBASIC20.14■□□□□ 0.81
UBA3Q8TBC4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
UBA3Q8TBC4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.13■□□□□ 0.81
UBA3Q8TBC4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms