Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 NUDT16P1-203ENST00000513809 620 ntBASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 AL355075.4-201ENST00000554988 638 ntBASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SMARCC2Q8TAQ2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 KRT8P41-201ENST00000533985 1514 ntBASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SMARCC2Q8TAQ2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 AC093525.10-201ENST00000625130 1569 ntBASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 AL031985.4-201ENST00000642138 673 ntBASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
SMARCC2Q8TAQ2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 AL031598.1-201ENST00000561511 1773 ntBASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 TSPY23P-201ENST00000440136 739 ntBASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 TSPY15P-201ENST00000457163 923 ntBASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.28■■□□□ 1.16
SMARCC2Q8TAQ2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 TSPY21P-201ENST00000433481 731 ntBASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 Z85996.1-201ENST00000494644 937 ntBASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
SMARCC2Q8TAQ2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms