Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCDC148Q8NFR7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCDC148Q8NFR7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 SLC25A1P4-201ENST00000567977 778 ntBASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 AP005242.2-201ENST00000580065 1175 ntBASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCDC148Q8NFR7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 MFAP1P1-201ENST00000442257 1255 ntBASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCDC148Q8NFR7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 AL020996.1-203ENST00000536896 2307 ntBASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCDC148Q8NFR7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 AP000525.1-201ENST00000608286 694 ntBASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 AC079598.2-202ENST00000546624 1451 ntBASIC21.9■■□□□ 1.1
CCDC148Q8NFR7 AL161938.1-201ENST00000569833 2180 ntBASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC148Q8NFR7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC148Q8NFR7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms