Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 IRX1P1-201ENST00000438849 1838 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AL355355.2-201ENST00000442321 338 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 FAM207BP-201ENST00000447172 505 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 B3GAT3P1-201ENST00000471720 806 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AC116562.2-201ENST00000507042 360 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 Z99916.2-201ENST00000604037 246 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SRFBP1Q8NEF9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 DGCR10-201ENST00000609839 495 ntBASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
SRFBP1Q8NEF9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
SRFBP1Q8NEF9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRFBP1Q8NEF9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.14■□□□□ 0.5
SRFBP1Q8NEF9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRFBP1Q8NEF9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SRFBP1Q8NEF9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AL161938.1-201ENST00000569833 2180 ntBASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SRFBP1Q8NEF9 AC011506.1-201ENST00000474329 610 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms