Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AL161938.1-201ENST00000569833 2180 ntBASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 KRT8P41-201ENST00000533985 1514 ntBASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AC141586.3-201ENST00000562166 1838 ntBASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AL445675.2-201ENST00000620291 557 ntBASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 CR392000.1-201ENST00000624770 1228 ntBASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SIMC1Q8NDZ2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 RPS2P55-201ENST00000397318 883 ntBASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 FAM197Y1-201ENST00000421178 764 ntBASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 AC107956.1-201ENST00000494359 873 ntBASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.93■□□□□ 0.46
SIMC1Q8NDZ2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
SIMC1Q8NDZ2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 LTB4R2-202ENST00000528054 3092 ntBASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SIMC1Q8NDZ2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms