Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP38Q8NB14 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.26■□□□□ 0.99
USP38Q8NB14 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP38Q8NB14 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.25■□□□□ 0.99
USP38Q8NB14 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 TSPY5P-201ENST00000426936 936 ntBASIC21.25■□□□□ 0.99
USP38Q8NB14 AC092647.4-201ENST00000457211 535 ntBASIC21.25■□□□□ 0.99
USP38Q8NB14 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.25■□□□□ 0.99
USP38Q8NB14 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.25■□□□□ 0.99
USP38Q8NB14 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.25■□□□□ 0.99
USP38Q8NB14 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
USP38Q8NB14 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP38Q8NB14 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.25■□□□□ 0.99
USP38Q8NB14 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.24■□□□□ 0.99
USP38Q8NB14 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
USP38Q8NB14 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
USP38Q8NB14 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 TSPY17P-201ENST00000450329 467 ntBASIC21.24■□□□□ 0.99
USP38Q8NB14 CA15P1-201ENST00000481698 905 ntBASIC21.24■□□□□ 0.99
USP38Q8NB14 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.24■□□□□ 0.99
USP38Q8NB14 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.24■□□□□ 0.99
USP38Q8NB14 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.24■□□□□ 0.99
USP38Q8NB14 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP38Q8NB14 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.24■□□□□ 0.99
USP38Q8NB14 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.24■□□□□ 0.99
USP38Q8NB14 AC098818.2-201ENST00000564925 2320 ntBASIC21.23■□□□□ 0.99
USP38Q8NB14 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
USP38Q8NB14 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 AL023803.3-201ENST00000615559 522 ntBASIC21.23■□□□□ 0.99
USP38Q8NB14 AL138966.2-201ENST00000621997 464 ntBASIC21.23■□□□□ 0.99
USP38Q8NB14 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP38Q8NB14 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.23■□□□□ 0.99
USP38Q8NB14 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
USP38Q8NB14 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
USP38Q8NB14 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.22■□□□□ 0.99
USP38Q8NB14 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 AC092338.2-201ENST00000568827 1415 ntBASIC21.22■□□□□ 0.99
USP38Q8NB14 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.22■□□□□ 0.99
USP38Q8NB14 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.22■□□□□ 0.99
USP38Q8NB14 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP38Q8NB14 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.22■□□□□ 0.99
USP38Q8NB14 AC007663.1-201ENST00000438948 1240 ntBASIC21.22■□□□□ 0.99
USP38Q8NB14 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.22■□□□□ 0.99
USP38Q8NB14 FDX1P1-201ENST00000449115 551 ntBASIC21.22■□□□□ 0.99
USP38Q8NB14 AL512604.3-201ENST00000569583 964 ntBASIC21.22■□□□□ 0.99
USP38Q8NB14 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP38Q8NB14 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
USP38Q8NB14 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP38Q8NB14 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP38Q8NB14 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.21■□□□□ 0.99
USP38Q8NB14 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP38Q8NB14 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP38Q8NB14 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP38Q8NB14 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP38Q8NB14 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP38Q8NB14 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.21■□□□□ 0.99
USP38Q8NB14 AC004263.2-201ENST00000617183 678 ntBASIC21.21■□□□□ 0.99
USP38Q8NB14 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.21■□□□□ 0.99
USP38Q8NB14 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.21■□□□□ 0.99
USP38Q8NB14 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms