Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 OR10C1-204ENST00000622521 1039 ntBASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 SDHAP1-207ENST00000440850 2000 ntBASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 AC010980.2-201ENST00000587099 1412 ntBASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC71LQ8N9Z2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 AC016769.1-201ENST00000409132 1010 ntBASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 DUX4L16-201ENST00000555130 1264 ntBASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 NOC2LP2-201ENST00000407594 1944 ntBASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC71LQ8N9Z2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 ANO7L1-203ENST00000602586 1720 ntBASIC15.83■□□□□ 0.13
CCDC71LQ8N9Z2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 AC034268.1-201ENST00000441047 882 ntBASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC71LQ8N9Z2 FEM1AP3-201ENST00000403722 1741 ntBASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC71LQ8N9Z2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms