Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 AL596275.1-201ENST00000423464 877 ntBASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 Z85996.1-201ENST00000494644 937 ntBASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 SDHAP1-207ENST00000440850 2000 ntBASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
C11orf42Q8N5U0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 TSPY7P-201ENST00000431358 1114 ntBASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 MIR4497-201ENST00000583208 89 ntBASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 AC131212.4-201ENST00000623606 975 ntBASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C11orf42Q8N5U0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
C11orf42Q8N5U0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 MESTP1-201ENST00000404287 994 ntBASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 SNORA78-201ENST00000459373 127 ntBASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AC116562.2-201ENST00000507042 360 ntBASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AL031985.4-201ENST00000642138 673 ntBASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 KRT8P41-201ENST00000533985 1514 ntBASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
C11orf42Q8N5U0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms