Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 Z85996.1-201ENST00000494644 937 ntBASIC15.05■□□□□ -0
TTC9CQ8N5M4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AC142381.4-202ENST00000563973 229 ntBASIC15.05■□□□□ -0
TTC9CQ8N5M4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.05■□□□□ -0
TTC9CQ8N5M4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TTC9CQ8N5M4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 AL135905.2-201ENST00000584934 1404 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 RPS2P4-201ENST00000476944 856 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 AF186192.3-201ENST00000583427 947 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 AC073195.1-201ENST00000607241 877 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 AC087289.5-201ENST00000586076 3175 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.04■□□□□ -0
TTC9CQ8N5M4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 TNXA-203ENST00000507684 2038 ntBASIC15.04■□□□□ -0
TTC9CQ8N5M4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TTC9CQ8N5M4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.03■□□□□ -0
TTC9CQ8N5M4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 KRT16P1-201ENST00000399124 1418 ntBASIC15.03■□□□□ -0
TTC9CQ8N5M4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.03■□□□□ -0
TTC9CQ8N5M4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.03■□□□□ -0
TTC9CQ8N5M4 TSPY23P-201ENST00000440136 739 ntBASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms