Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 TMEM191A-211ENST00000637163 1067 ntBASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC116Q8IYX3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 TSPY23P-201ENST00000440136 739 ntBASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 AL031985.4-201ENST00000642138 673 ntBASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 AC006333.2-201ENST00000607957 2099 ntBASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC116Q8IYX3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 AL135905.2-201ENST00000584934 1404 ntBASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 AC138932.1-201ENST00000534164 6830 ntBASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 FAM197Y1-201ENST00000421178 764 ntBASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC116Q8IYX3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC116Q8IYX3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms