Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM48Q8IWZ4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 TSPY14P-201ENST00000303979 915 ntBASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 AC116562.4-202ENST00000641738 218 ntBASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM48Q8IWZ4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 LIN28AP1-201ENST00000429574 405 ntBASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 PRSS44-201ENST00000515154 1146 ntBASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM48Q8IWZ4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 AL020996.1-203ENST00000536896 2307 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 AL137013.1-201ENST00000432946 1228 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 SLC25A3P1-201ENST00000443844 931 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 CKBP1-201ENST00000565489 1086 ntBASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.65■□□□□ 0.58
TRIM48Q8IWZ4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM48Q8IWZ4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TRIM48Q8IWZ4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.64■□□□□ 0.58
TRIM48Q8IWZ4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRIM48Q8IWZ4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.58
TRIM48Q8IWZ4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.64■□□□□ 0.57
TRIM48Q8IWZ4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms