Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC026366.1-201ENST00000488803 879 ntBASIC16.93■□□□□ 0.3
LRRC28Q86X40 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LRRC28Q86X40 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRRC28Q86X40 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 UNC93B4-201ENST00000505679 747 ntBASIC16.92■□□□□ 0.3
LRRC28Q86X40 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 AP003097.1-201ENST00000530657 1135 ntBASIC16.92■□□□□ 0.3
LRRC28Q86X40 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRRC28Q86X40 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.92■□□□□ 0.3
LRRC28Q86X40 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.91■□□□□ 0.3
LRRC28Q86X40 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 ITM2C-210ENST00000620962 501 ntBASIC16.91■□□□□ 0.3
LRRC28Q86X40 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRRC28Q86X40 TEX21P-204ENST00000641479 1693 ntBASIC16.91■□□□□ 0.3
LRRC28Q86X40 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
LRRC28Q86X40 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC28Q86X40 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.9■□□□□ 0.3
LRRC28Q86X40 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC28Q86X40 AL031963.3-201ENST00000606441 850 ntBASIC16.9■□□□□ 0.3
LRRC28Q86X40 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms