Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.53■□□□□ 0.24
LRRTM1Q86UE6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRTM1Q86UE6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRTM1Q86UE6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 MKRN4P-201ENST00000444706 1521 ntBASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 BX276092.2-201ENST00000417668 665 ntBASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 KRT18P16-201ENST00000510337 1294 ntBASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 AC073592.3-201ENST00000625118 1834 ntBASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms