Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19■□□□□ 0.63
LDB1Q86U70 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19■□□□□ 0.63
LDB1Q86U70 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LDB1Q86U70 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19■□□□□ 0.63
LDB1Q86U70 RARRES2P10-201ENST00000564312 460 ntBASIC19■□□□□ 0.63
LDB1Q86U70 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LDB1Q86U70 AL353708.3-201ENST00000610272 989 ntBASIC19■□□□□ 0.63
LDB1Q86U70 AC131212.4-201ENST00000623606 975 ntBASIC19■□□□□ 0.63
LDB1Q86U70 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19■□□□□ 0.63
LDB1Q86U70 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19■□□□□ 0.63
LDB1Q86U70 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19■□□□□ 0.63
LDB1Q86U70 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19■□□□□ 0.63
LDB1Q86U70 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19■□□□□ 0.63
LDB1Q86U70 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LDB1Q86U70 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19■□□□□ 0.63
LDB1Q86U70 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.99■□□□□ 0.63
LDB1Q86U70 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
LDB1Q86U70 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.99■□□□□ 0.63
LDB1Q86U70 KSR1P1-201ENST00000446298 240 ntBASIC18.99■□□□□ 0.63
LDB1Q86U70 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB1Q86U70 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.99■□□□□ 0.63
LDB1Q86U70 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB1Q86U70 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.99■□□□□ 0.63
LDB1Q86U70 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.99■□□□□ 0.63
LDB1Q86U70 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LDB1Q86U70 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
LDB1Q86U70 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
LDB1Q86U70 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 AC020763.4-201ENST00000623414 4170 ntBASIC18.99■□□□□ 0.63
LDB1Q86U70 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
LDB1Q86U70 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LDB1Q86U70 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LDB1Q86U70 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB1Q86U70 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LDB1Q86U70 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.98■□□□□ 0.63
LDB1Q86U70 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.98■□□□□ 0.63
LDB1Q86U70 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.98■□□□□ 0.63
LDB1Q86U70 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 KRT16P1-201ENST00000399124 1418 ntBASIC18.98■□□□□ 0.63
LDB1Q86U70 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LDB1Q86U70 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB1Q86U70 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.97■□□□□ 0.63
LDB1Q86U70 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LDB1Q86U70 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LDB1Q86U70 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 FAM197Y1-201ENST00000421178 764 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 AL353807.1-201ENST00000427475 662 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 TSPY21P-201ENST00000433481 731 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 AC008040.2-201ENST00000461049 708 ntBASIC18.97■□□□□ 0.63
LDB1Q86U70 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB1Q86U70 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB1Q86U70 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.97■□□□□ 0.63
LDB1Q86U70 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB1Q86U70 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms