Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 DUSP5P2-201ENST00000426873 1033 ntBASIC17.21■□□□□ 0.35
SHFQ7M4L6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.21■□□□□ 0.35
SHFQ7M4L6 AC092118.2-201ENST00000613495 667 ntBASIC17.21■□□□□ 0.35
SHFQ7M4L6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 LTB4R2-202ENST00000528054 3092 ntBASIC17.21■□□□□ 0.35
SHFQ7M4L6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHFQ7M4L6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
SHFQ7M4L6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHFQ7M4L6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHFQ7M4L6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 CROCCP5-201ENST00000436658 830 ntBASIC17.2■□□□□ 0.34
SHFQ7M4L6 AC006970.2-201ENST00000450065 779 ntBASIC17.2■□□□□ 0.34
SHFQ7M4L6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 AC083906.2-201ENST00000511578 360 ntBASIC17.2■□□□□ 0.34
SHFQ7M4L6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.2■□□□□ 0.34
SHFQ7M4L6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHFQ7M4L6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 SLC29A4P1-201ENST00000398760 971 ntBASIC17.19■□□□□ 0.34
SHFQ7M4L6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 AC091874.3-201ENST00000512672 1195 ntBASIC17.19■□□□□ 0.34
SHFQ7M4L6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 BCL2-203ENST00000589955 5011 ntBASIC17.19■□□□□ 0.34
SHFQ7M4L6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SHFQ7M4L6 BICD1-207ENST00000551848 1962 ntBASIC17.19■□□□□ 0.34
SHFQ7M4L6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
SHFQ7M4L6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SHFQ7M4L6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.18■□□□□ 0.34
SHFQ7M4L6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms