Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 AL596275.1-201ENST00000423464 877 ntBASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 TSPY15P-201ENST00000457163 923 ntBASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
DENND1BQ6P3S1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 PRSS44-201ENST00000515154 1146 ntBASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 SLC25A1P4-201ENST00000567977 778 ntBASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 MIR4497-201ENST00000583208 89 ntBASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 MIR4785-201ENST00000585005 73 ntBASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND1BQ6P3S1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.14■□□□□ 0.82
DENND1BQ6P3S1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 RBM17P1-201ENST00000453646 1190 ntBASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DENND1BQ6P3S1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 AC097488.1-201ENST00000507834 756 ntBASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 AL355075.4-201ENST00000554988 638 ntBASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 AC006333.2-201ENST00000607957 2099 ntBASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DENND1BQ6P3S1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 AC079598.2-202ENST00000546624 1451 ntBASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.12■□□□□ 0.81
DENND1BQ6P3S1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms