Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.18■□□□□ 0.34
RTL6Q6ICC9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 AL353719.1-201ENST00000566847 864 ntBASIC17.17■□□□□ 0.34
RTL6Q6ICC9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL6Q6ICC9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 TSPY17P-201ENST00000450329 467 ntBASIC17.16■□□□□ 0.34
RTL6Q6ICC9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 AC063952.2-201ENST00000498792 1227 ntBASIC17.16■□□□□ 0.34
RTL6Q6ICC9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 CKBP1-201ENST00000565489 1086 ntBASIC17.16■□□□□ 0.34
RTL6Q6ICC9 AC087388.1-201ENST00000571370 1112 ntBASIC17.16■□□□□ 0.34
RTL6Q6ICC9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 AC139887.4-201ENST00000607877 719 ntBASIC17.16■□□□□ 0.34
RTL6Q6ICC9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RTL6Q6ICC9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 AC022616.7-201ENST00000525383 220 ntBASIC17.15■□□□□ 0.34
RTL6Q6ICC9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL6Q6ICC9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.14■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms