Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
RNF213Q63HN8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
RNF213Q63HN8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC10.18□□□□□ -0.78
RNF213Q63HN8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RNF213Q63HN8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
RNF213Q63HN8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC093512.1-201ENST00000617969 520 ntBASIC10.17□□□□□ -0.78
RNF213Q63HN8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 H19-201ENST00000411754 1788 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RNF213Q63HN8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC10.17□□□□□ -0.78
RNF213Q63HN8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AP001269.4-201ENST00000609611 512 ntBASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 PRSS29P-201ENST00000440800 595 ntBASIC10.16□□□□□ -0.78
RNF213Q63HN8 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AL355877.3-201ENST00000622820 899 ntBASIC10.16□□□□□ -0.78
RNF213Q63HN8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC008608.2-201ENST00000606089 416 ntBASIC10.16□□□□□ -0.78
RNF213Q63HN8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RNF213Q63HN8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 AC036111.1-201ENST00000533973 1582 ntBASIC10.16□□□□□ -0.78
RNF213Q63HN8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC10.16□□□□□ -0.78
RNF213Q63HN8 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.15□□□□□ -0.78
RNF213Q63HN8 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.78
RNF213Q63HN8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
RNF213Q63HN8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms