Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.78■□□□□ 0.76
LRRC38Q5VT99 KSR1P1-201ENST00000446298 240 ntBASIC19.78■□□□□ 0.76
LRRC38Q5VT99 AC128676.1-201ENST00000454392 318 ntBASIC19.78■□□□□ 0.76
LRRC38Q5VT99 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PRSS44-201ENST00000515154 1146 ntBASIC19.78■□□□□ 0.76
LRRC38Q5VT99 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRRC38Q5VT99 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 KRT8P11-201ENST00000409686 1436 ntBASIC19.77■□□□□ 0.76
LRRC38Q5VT99 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ANO7L1-203ENST00000602586 1720 ntBASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 AL353807.1-201ENST00000427475 662 ntBASIC19.77■□□□□ 0.76
LRRC38Q5VT99 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 CD99P1-205ENST00000527459 561 ntBASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC38Q5VT99 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LRRC38Q5VT99 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 HTR7P1-201ENST00000538670 1336 ntBASIC19.76■□□□□ 0.75
LRRC38Q5VT99 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 AP002982.1-201ENST00000492365 877 ntBASIC19.76■□□□□ 0.75
LRRC38Q5VT99 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC38Q5VT99 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 RCC2P6-201ENST00000526625 1557 ntBASIC19.75■□□□□ 0.75
LRRC38Q5VT99 AC090164.3-201ENST00000610780 2143 ntBASIC19.75■□□□□ 0.75
LRRC38Q5VT99 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 AC026271.3-201ENST00000571884 352 ntBASIC19.75■□□□□ 0.75
LRRC38Q5VT99 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC38Q5VT99 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms