Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RN7SL606P-201ENST00000472779 293 ntBASIC25.73■■□□□ 1.71
COL16A1Q07092 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.73■■□□□ 1.71
COL16A1Q07092 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
COL16A1Q07092 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
COL16A1Q07092 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.73■■□□□ 1.71
COL16A1Q07092 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.72■■□□□ 1.71
COL16A1Q07092 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.72■■□□□ 1.71
COL16A1Q07092 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 YBX2P1-201ENST00000394192 760 ntBASIC25.72■■□□□ 1.71
COL16A1Q07092 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
COL16A1Q07092 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC25.72■■□□□ 1.71
COL16A1Q07092 MIR3197-201ENST00000582241 73 ntBASIC25.72■■□□□ 1.71
COL16A1Q07092 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC25.72■■□□□ 1.71
COL16A1Q07092 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC25.72■■□□□ 1.71
COL16A1Q07092 IGHV3-41-201ENST00000613121 348 ntBASIC25.72■■□□□ 1.71
COL16A1Q07092 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
COL16A1Q07092 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC25.72■■□□□ 1.71
COL16A1Q07092 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
COL16A1Q07092 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC25.72■■□□□ 1.71
COL16A1Q07092 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
COL16A1Q07092 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
COL16A1Q07092 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC25.71■■□□□ 1.71
COL16A1Q07092 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.71■■□□□ 1.71
COL16A1Q07092 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC25.71■■□□□ 1.71
COL16A1Q07092 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC25.71■■□□□ 1.71
COL16A1Q07092 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.71■■□□□ 1.71
COL16A1Q07092 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC25.71■■□□□ 1.71
COL16A1Q07092 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.71■■□□□ 1.71
COL16A1Q07092 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
COL16A1Q07092 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.71
COL16A1Q07092 MED15P5-201ENST00000423150 992 ntBASIC25.7■■□□□ 1.71
COL16A1Q07092 HNRNPDP1-201ENST00000439535 754 ntBASIC25.7■■□□□ 1.71
COL16A1Q07092 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC25.7■■□□□ 1.71
COL16A1Q07092 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC25.7■■□□□ 1.71
COL16A1Q07092 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC25.7■■□□□ 1.71
COL16A1Q07092 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.7■■□□□ 1.71
COL16A1Q07092 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC25.7■■□□□ 1.71
COL16A1Q07092 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
COL16A1Q07092 FAM215A-202ENST00000632077 792 ntBASIC25.7■■□□□ 1.71
COL16A1Q07092 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
COL16A1Q07092 SMG8-203ENST00000578922 2178 ntBASIC25.7■■□□□ 1.7
COL16A1Q07092 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.7■■□□□ 1.7
COL16A1Q07092 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.7■■□□□ 1.7
COL16A1Q07092 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC25.7■■□□□ 1.7
COL16A1Q07092 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC25.7■■□□□ 1.7
COL16A1Q07092 AC010240.3-201ENST00000607688 395 ntBASIC25.7■■□□□ 1.7
COL16A1Q07092 FAM197Y3-203ENST00000618346 717 ntBASIC25.7■■□□□ 1.7
COL16A1Q07092 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC25.7■■□□□ 1.7
COL16A1Q07092 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
COL16A1Q07092 AC006128.1-201ENST00000624704 1661 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC25.69■■□□□ 1.7
COL16A1Q07092 AC007225.1-201ENST00000566331 1836 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
COL16A1Q07092 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
COL16A1Q07092 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL16A1Q07092 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL16A1Q07092 IGHGP-201ENST00000390555 1178 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 FIS1-203ENST00000442303 631 ntTSL 3 BASIC25.69■■□□□ 1.7
COL16A1Q07092 SCARNA2-201ENST00000458748 420 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 IRF8-202ENST00000562492 946 ntTSL 3 BASIC25.69■■□□□ 1.7
COL16A1Q07092 AL356488.2-201ENST00000602755 427 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 AC124864.1-201ENST00000623408 392 ntBASIC25.69■■□□□ 1.7
COL16A1Q07092 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL16A1Q07092 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
COL16A1Q07092 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
COL16A1Q07092 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC25.68■■□□□ 1.7
COL16A1Q07092 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL16A1Q07092 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
COL16A1Q07092 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
COL16A1Q07092 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC25.68■■□□□ 1.7
COL16A1Q07092 CSF3-203ENST00000394148 622 ntTSL 3 BASIC25.68■■□□□ 1.7
COL16A1Q07092 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC25.68■■□□□ 1.7
COL16A1Q07092 DHDH-204ENST00000523250 634 ntTSL 5 BASIC25.68■■□□□ 1.7
COL16A1Q07092 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC25.68■■□□□ 1.7
COL16A1Q07092 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC25.68■■□□□ 1.7
COL16A1Q07092 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC25.68■■□□□ 1.7
COL16A1Q07092 AC034105.1-201ENST00000563488 319 ntBASIC25.68■■□□□ 1.7
COL16A1Q07092 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC25.68■■□□□ 1.7
COL16A1Q07092 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms