Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM4P67936 KRT8P8-201ENST00000434750 1448 ntBASIC21.33■■□□□ 1.01
TPM4P67936 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TPM4P67936 AC093787.1-201ENST00000450396 207 ntBASIC21.33■■□□□ 1.01
TPM4P67936 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TPM4P67936 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.33■■□□□ 1.01
TPM4P67936 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.33■■□□□ 1.01
TPM4P67936 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM4P67936 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TPM4P67936 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1
TPM4P67936 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.33■■□□□ 1
TPM4P67936 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
TPM4P67936 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TPM4P67936 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.33■■□□□ 1
TPM4P67936 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.33■■□□□ 1
TPM4P67936 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TPM4P67936 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.33■■□□□ 1
TPM4P67936 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 BICD1-207ENST00000551848 1962 ntBASIC21.32■■□□□ 1
TPM4P67936 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TPM4P67936 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.32■■□□□ 1
TPM4P67936 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.32■■□□□ 1
TPM4P67936 AC073210.2-201ENST00000430369 194 ntBASIC21.32■■□□□ 1
TPM4P67936 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.32■■□□□ 1
TPM4P67936 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.32■■□□□ 1
TPM4P67936 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TPM4P67936 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TPM4P67936 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.31■■□□□ 1
TPM4P67936 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.31■■□□□ 1
TPM4P67936 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.31■■□□□ 1
TPM4P67936 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.31■■□□□ 1
TPM4P67936 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TPM4P67936 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.31■■□□□ 1
TPM4P67936 AC006015.1-201ENST00000429970 570 ntBASIC21.31■■□□□ 1
TPM4P67936 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.31■■□□□ 1
TPM4P67936 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 AC018470.1-201ENST00000624790 3129 ntBASIC21.31■■□□□ 1
TPM4P67936 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TPM4P67936 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TPM4P67936 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TPM4P67936 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TPM4P67936 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
TPM4P67936 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TPM4P67936 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TPM4P67936 FEM1AP3-201ENST00000403722 1741 ntBASIC21.3■■□□□ 1
TPM4P67936 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.3■■□□□ 1
TPM4P67936 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.3■■□□□ 1
TPM4P67936 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
TPM4P67936 KRT18P5-201ENST00000436075 1291 ntBASIC21.3■■□□□ 1
TPM4P67936 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.3■■□□□ 1
TPM4P67936 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.3■■□□□ 1
TPM4P67936 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.3■■□□□ 1
TPM4P67936 LTB4R2-202ENST00000528054 3092 ntBASIC21.3■■□□□ 1
TPM4P67936 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.3■■□□□ 1
TPM4P67936 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TPM4P67936 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM4P67936 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.29■■□□□ 1
TPM4P67936 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.29■■□□□ 1
TPM4P67936 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM4P67936 AL354751.1-201ENST00000412768 1863 ntBASIC21.29■■□□□ 1
TPM4P67936 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.29■■□□□ 1
TPM4P67936 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TPM4P67936 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.29■■□□□ 1
TPM4P67936 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.29■■□□□ 1
TPM4P67936 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
TPM4P67936 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.29■■□□□ 1
TPM4P67936 YBX1P10-201ENST00000444752 975 ntBASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms