Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3AP56704 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3AP56704 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 FSCN1P1-201ENST00000568912 1481 ntBASIC19.25■□□□□ 0.67
WNT3AP56704 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
WNT3AP56704 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.25■□□□□ 0.67
WNT3AP56704 NUDT16P1-203ENST00000513809 620 ntBASIC19.25■□□□□ 0.67
WNT3AP56704 PRSS44-201ENST00000515154 1146 ntBASIC19.25■□□□□ 0.67
WNT3AP56704 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.25■□□□□ 0.67
WNT3AP56704 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.25■□□□□ 0.67
WNT3AP56704 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.25■□□□□ 0.67
WNT3AP56704 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
WNT3AP56704 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
WNT3AP56704 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.25■□□□□ 0.67
WNT3AP56704 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.25■□□□□ 0.67
WNT3AP56704 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
WNT3AP56704 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3AP56704 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3AP56704 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3AP56704 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3AP56704 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3AP56704 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.24■□□□□ 0.67
WNT3AP56704 FAM207BP-201ENST00000447172 505 ntBASIC19.24■□□□□ 0.67
WNT3AP56704 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.24■□□□□ 0.67
WNT3AP56704 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3AP56704 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.24■□□□□ 0.67
WNT3AP56704 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
WNT3AP56704 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.24■□□□□ 0.67
WNT3AP56704 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.23■□□□□ 0.67
WNT3AP56704 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
WNT3AP56704 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
WNT3AP56704 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
WNT3AP56704 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.23■□□□□ 0.67
WNT3AP56704 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
WNT3AP56704 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 AC004408.2-201ENST00000623613 2777 ntBASIC19.22■□□□□ 0.67
WNT3AP56704 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3AP56704 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.22■□□□□ 0.67
WNT3AP56704 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
WNT3AP56704 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
WNT3AP56704 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3AP56704 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 MIR718-201ENST00000390190 70 ntBASIC19.22■□□□□ 0.67
WNT3AP56704 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.22■□□□□ 0.67
WNT3AP56704 AC116562.2-201ENST00000507042 360 ntBASIC19.22■□□□□ 0.67
WNT3AP56704 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.22■□□□□ 0.67
WNT3AP56704 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 AP000692.2-201ENST00000608391 879 ntBASIC19.22■□□□□ 0.67
WNT3AP56704 AP006294.2-201ENST00000641667 209 ntBASIC19.22■□□□□ 0.67
WNT3AP56704 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
WNT3AP56704 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.22■□□□□ 0.67
WNT3AP56704 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.22■□□□□ 0.67
WNT3AP56704 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
WNT3AP56704 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms