Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CDH4P55283 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.47■□□□□ 0.71
CDH4P55283 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 SLC25A3P1-201ENST00000443844 931 ntBASIC19.47■□□□□ 0.71
CDH4P55283 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH4P55283 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH4P55283 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CDH4P55283 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 KRT8P3-201ENST00000519669 1449 ntBASIC19.47■□□□□ 0.71
CDH4P55283 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDH4P55283 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CDH4P55283 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH4P55283 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH4P55283 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH4P55283 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH4P55283 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH4P55283 HMGA1P5-201ENST00000412453 271 ntBASIC19.46■□□□□ 0.71
CDH4P55283 AC113347.1-201ENST00000413321 391 ntBASIC19.46■□□□□ 0.71
CDH4P55283 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH4P55283 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.46■□□□□ 0.71
CDH4P55283 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.46■□□□□ 0.71
CDH4P55283 AP003041.3-201ENST00000527151 707 ntBASIC19.46■□□□□ 0.71
CDH4P55283 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CDH4P55283 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH4P55283 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH4P55283 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CDH4P55283 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CDH4P55283 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.46■□□□□ 0.71
CDH4P55283 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH4P55283 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH4P55283 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH4P55283 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CDH4P55283 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDH4P55283 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH4P55283 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH4P55283 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH4P55283 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH4P55283 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
CDH4P55283 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CDH4P55283 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH4P55283 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 AIRN-201ENST00000601203 4374 ntBASIC19.44■□□□□ 0.7
CDH4P55283 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH4P55283 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CDH4P55283 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CDH4P55283 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.44■□□□□ 0.7
CDH4P55283 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.44■□□□□ 0.7
CDH4P55283 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDH4P55283 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CDH4P55283 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CDH4P55283 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDH4P55283 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.44■□□□□ 0.7
CDH4P55283 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.44■□□□□ 0.7
CDH4P55283 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH4P55283 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDH4P55283 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDH4P55283 AL137013.1-201ENST00000432946 1228 ntBASIC19.43■□□□□ 0.7
CDH4P55283 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms