Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.96□□□□□ -0.17
APOC4P55056 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
APOC4P55056 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC4P55056 AL023803.3-201ENST00000615559 522 ntBASIC13.96□□□□□ -0.17
APOC4P55056 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.96□□□□□ -0.17
APOC4P55056 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
APOC4P55056 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
APOC4P55056 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
APOC4P55056 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC4P55056 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.96□□□□□ -0.18
APOC4P55056 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
APOC4P55056 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.96□□□□□ -0.18
APOC4P55056 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
APOC4P55056 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
APOC4P55056 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
APOC4P55056 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.95□□□□□ -0.18
APOC4P55056 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC13.95□□□□□ -0.18
APOC4P55056 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 AC010203.1-204ENST00000548782 407 ntBASIC13.95□□□□□ -0.18
APOC4P55056 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
APOC4P55056 AL031432.5-201ENST00000641059 760 ntBASIC13.95□□□□□ -0.18
APOC4P55056 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.95□□□□□ -0.18
APOC4P55056 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.95□□□□□ -0.18
APOC4P55056 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 Z82202.1-201ENST00000623446 1880 ntBASIC13.95□□□□□ -0.18
APOC4P55056 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
APOC4P55056 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 TSPY23P-201ENST00000440136 739 ntBASIC13.94□□□□□ -0.18
APOC4P55056 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
APOC4P55056 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 AP003041.3-201ENST00000527151 707 ntBASIC13.94□□□□□ -0.18
APOC4P55056 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
APOC4P55056 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
APOC4P55056 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.94□□□□□ -0.18
APOC4P55056 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms