Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 IRX1P1-201ENST00000438849 1838 ntBASIC20.35■□□□□ 0.85
RAD23BP54727 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.35■□□□□ 0.85
RAD23BP54727 RBM17P1-201ENST00000453646 1190 ntBASIC20.35■□□□□ 0.85
RAD23BP54727 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.35■□□□□ 0.85
RAD23BP54727 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
RAD23BP54727 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.35■□□□□ 0.85
RAD23BP54727 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 DGCR10-201ENST00000609839 495 ntBASIC20.35■□□□□ 0.85
RAD23BP54727 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RAD23BP54727 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAD23BP54727 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.35■□□□□ 0.85
RAD23BP54727 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAD23BP54727 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RAD23BP54727 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RAD23BP54727 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RAD23BP54727 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAD23BP54727 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.34■□□□□ 0.85
RAD23BP54727 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.34■□□□□ 0.85
RAD23BP54727 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.34■□□□□ 0.85
RAD23BP54727 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.34■□□□□ 0.85
RAD23BP54727 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 AC079598.2-202ENST00000546624 1451 ntBASIC20.34■□□□□ 0.85
RAD23BP54727 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD23BP54727 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.33■□□□□ 0.85
RAD23BP54727 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.33■□□□□ 0.85
RAD23BP54727 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
RAD23BP54727 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.33■□□□□ 0.85
RAD23BP54727 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RAD23BP54727 PRSS44-201ENST00000515154 1146 ntBASIC20.33■□□□□ 0.85
RAD23BP54727 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAD23BP54727 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.33■□□□□ 0.85
RAD23BP54727 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.33■□□□□ 0.85
RAD23BP54727 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.33■□□□□ 0.85
RAD23BP54727 AL161938.1-201ENST00000569833 2180 ntBASIC20.33■□□□□ 0.85
RAD23BP54727 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
RAD23BP54727 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAD23BP54727 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.32■□□□□ 0.84
RAD23BP54727 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 AC097488.1-201ENST00000507834 756 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.32■□□□□ 0.84
RAD23BP54727 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 CKBP1-201ENST00000565489 1086 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RAD23BP54727 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.32■□□□□ 0.84
RAD23BP54727 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 FEM1AP3-201ENST00000403722 1741 ntBASIC20.32■□□□□ 0.84
RAD23BP54727 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD23BP54727 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms