Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.63■□□□□ 0.73
COPAP53621 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPAP53621 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COPAP53621 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COPAP53621 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.62■□□□□ 0.73
COPAP53621 INGX-201ENST00000359239 846 ntBASIC19.62■□□□□ 0.73
COPAP53621 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COPAP53621 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 ECEL1P2-202ENST00000465689 757 ntBASIC19.62■□□□□ 0.73
COPAP53621 Z85996.1-201ENST00000494644 937 ntBASIC19.62■□□□□ 0.73
COPAP53621 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.62■□□□□ 0.73
COPAP53621 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COPAP53621 SLC25A1P4-201ENST00000567977 778 ntBASIC19.62■□□□□ 0.73
COPAP53621 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.62■□□□□ 0.73
COPAP53621 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.62■□□□□ 0.73
COPAP53621 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.62■□□□□ 0.73
COPAP53621 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.62■□□□□ 0.73
COPAP53621 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COPAP53621 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.61■□□□□ 0.73
COPAP53621 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.61■□□□□ 0.73
COPAP53621 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.61■□□□□ 0.73
COPAP53621 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.61■□□□□ 0.73
COPAP53621 AL590326.2-201ENST00000625139 305 ntBASIC19.61■□□□□ 0.73
COPAP53621 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COPAP53621 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.61■□□□□ 0.73
COPAP53621 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.6■□□□□ 0.73
COPAP53621 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.6■□□□□ 0.73
COPAP53621 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
COPAP53621 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.6■□□□□ 0.73
COPAP53621 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
COPAP53621 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.6■□□□□ 0.73
COPAP53621 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.6■□□□□ 0.73
COPAP53621 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COPAP53621 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COPAP53621 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 AC096733.2-201ENST00000609937 1394 ntBASIC19.59■□□□□ 0.73
COPAP53621 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.59■□□□□ 0.73
COPAP53621 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.59■□□□□ 0.73
COPAP53621 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.59■□□□□ 0.73
COPAP53621 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.59■□□□□ 0.73
COPAP53621 FAM207BP-201ENST00000447172 505 ntBASIC19.59■□□□□ 0.73
COPAP53621 AC104076.2-201ENST00000448912 469 ntBASIC19.59■□□□□ 0.73
COPAP53621 AC091390.4-202ENST00000476426 537 ntBASIC19.59■□□□□ 0.73
COPAP53621 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
COPAP53621 FAM87A-204ENST00000613235 858 ntBASIC19.59■□□□□ 0.73
COPAP53621 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COPAP53621 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COPAP53621 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms