Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC093525.10-201ENST00000625130 1569 ntBASIC16.6■□□□□ 0.25
HCFC1P51610 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1P51610 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
HCFC1P51610 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.6■□□□□ 0.25
HCFC1P51610 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.6■□□□□ 0.25
HCFC1P51610 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HCFC1P51610 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HCFC1P51610 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.6■□□□□ 0.25
HCFC1P51610 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HCFC1P51610 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1P51610 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1P51610 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCFC1P51610 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HCFC1P51610 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.59■□□□□ 0.25
HCFC1P51610 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HCFC1P51610 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.59■□□□□ 0.25
HCFC1P51610 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 AC020907.5-201ENST00000624372 1936 ntBASIC16.59■□□□□ 0.25
HCFC1P51610 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCFC1P51610 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HCFC1P51610 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HCFC1P51610 AC009237.14-201ENST00000609975 1594 ntBASIC16.59■□□□□ 0.25
HCFC1P51610 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCFC1P51610 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
HCFC1P51610 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCFC1P51610 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
HCFC1P51610 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HCFC1P51610 HLA-F-220ENST00000434407 884 ntBASIC16.58■□□□□ 0.25
HCFC1P51610 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HCFC1P51610 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.58■□□□□ 0.25
HCFC1P51610 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.58■□□□□ 0.25
HCFC1P51610 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.58■□□□□ 0.25
HCFC1P51610 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.58■□□□□ 0.25
HCFC1P51610 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.58■□□□□ 0.25
HCFC1P51610 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.58■□□□□ 0.25
HCFC1P51610 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.58■□□□□ 0.25
HCFC1P51610 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1P51610 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.58■□□□□ 0.24
HCFC1P51610 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1P51610 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.58■□□□□ 0.24
HCFC1P51610 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HCFC1P51610 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HCFC1P51610 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1P51610 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.58■□□□□ 0.24
HCFC1P51610 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HCFC1P51610 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 AC099778.1-201ENST00000568593 1911 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 FDX1P1-201ENST00000449115 551 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 SEC1P-202ENST00000473944 940 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.57■□□□□ 0.24
HCFC1P51610 AC034232.1-201ENST00000506026 1064 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.57■□□□□ 0.24
HCFC1P51610 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.57■□□□□ 0.24
HCFC1P51610 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
HCFC1P51610 AL121672.3-201ENST00000608644 468 ntBASIC16.57■□□□□ 0.24
HCFC1P51610 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.57■□□□□ 0.24
HCFC1P51610 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.57■□□□□ 0.24
HCFC1P51610 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HCFC1P51610 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms