Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SRP9P49458 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.88■□□□□ 0.29
SRP9P49458 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.88■□□□□ 0.29
SRP9P49458 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
SRP9P49458 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.88■□□□□ 0.29
SRP9P49458 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SRP9P49458 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SRP9P49458 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 AC090164.3-201ENST00000610780 2143 ntBASIC16.87■□□□□ 0.29
SRP9P49458 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.87■□□□□ 0.29
SRP9P49458 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 POM121L13P-201ENST00000422362 380 ntBASIC16.87■□□□□ 0.29
SRP9P49458 RPS2P52-201ENST00000469610 820 ntBASIC16.87■□□□□ 0.29
SRP9P49458 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
SRP9P49458 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SRP9P49458 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.87■□□□□ 0.29
SRP9P49458 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.87■□□□□ 0.29
SRP9P49458 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 WIZP1-201ENST00000531444 2299 ntBASIC16.87■□□□□ 0.29
SRP9P49458 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.87■□□□□ 0.29
SRP9P49458 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SRP9P49458 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SRP9P49458 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.86■□□□□ 0.29
SRP9P49458 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 POU5F1P3-201ENST00000428824 1078 ntBASIC16.86■□□□□ 0.29
SRP9P49458 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SRP9P49458 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.86■□□□□ 0.29
SRP9P49458 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 AL121906.2-201ENST00000621597 723 ntBASIC16.86■□□□□ 0.29
SRP9P49458 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SRP9P49458 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 AC068880.1-201ENST00000507289 2297 ntBASIC16.86■□□□□ 0.29
SRP9P49458 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SRP9P49458 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.86■□□□□ 0.29
SRP9P49458 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SRP9P49458 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.85■□□□□ 0.29
SRP9P49458 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.85■□□□□ 0.29
SRP9P49458 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.85■□□□□ 0.29
SRP9P49458 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.85■□□□□ 0.29
SRP9P49458 MIR4651-201ENST00000582622 73 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms