Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.07■□□□□ 0.8
RFC1P35251 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.07■□□□□ 0.8
RFC1P35251 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC1P35251 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RFC1P35251 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC1P35251 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC1P35251 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RFC1P35251 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFC1P35251 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFC1P35251 AC120498.9-201ENST00000339021 3867 ntBASIC20.06■□□□□ 0.8
RFC1P35251 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC1P35251 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RFC1P35251 TSPY21P-201ENST00000433481 731 ntBASIC20.06■□□□□ 0.8
RFC1P35251 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC1P35251 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.06■□□□□ 0.8
RFC1P35251 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC1P35251 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC1P35251 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC1P35251 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC1P35251 AC073195.1-201ENST00000607241 877 ntBASIC20.06■□□□□ 0.8
RFC1P35251 CR392000.1-201ENST00000624770 1228 ntBASIC20.06■□□□□ 0.8
RFC1P35251 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC1P35251 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 AC006333.2-201ENST00000607957 2099 ntBASIC20.06■□□□□ 0.8
RFC1P35251 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC1P35251 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.05■□□□□ 0.8
RFC1P35251 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC1P35251 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC1P35251 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC1P35251 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 KRT16P1-201ENST00000399124 1418 ntBASIC20.05■□□□□ 0.8
RFC1P35251 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC1P35251 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RFC1P35251 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFC1P35251 UBE2SP1-201ENST00000450587 669 ntBASIC20.05■□□□□ 0.8
RFC1P35251 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.05■□□□□ 0.8
RFC1P35251 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC1P35251 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC1P35251 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RFC1P35251 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 AC093503.3-201ENST00000624917 2352 ntBASIC20.05■□□□□ 0.8
RFC1P35251 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC1P35251 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC1P35251 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.04■□□□□ 0.8
RFC1P35251 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC1P35251 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFC1P35251 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.04■□□□□ 0.8
RFC1P35251 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.04■□□□□ 0.8
RFC1P35251 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFC1P35251 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC1P35251 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.04■□□□□ 0.8
RFC1P35251 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFC1P35251 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.04■□□□□ 0.8
RFC1P35251 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RFC1P35251 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC1P35251 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC1P35251 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RFC1P35251 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC1P35251 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms